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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
913
accessible chromatin
817
binding sites
537
gene expression
167
differential activity
145
eQTL
140
variant allelic effects
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2507
February, 2021
1678
September, 2022
384
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
March, 2020
106
January, 2022
103
August, 2021
101
October, 2022
83
January, 2020
70
March, 2023
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5923
bed bed3+
bed bed9
853
tsv
546
bigWig
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6863
Homo sapiens
Biosample type
2183
primary cell
2173
cell line
2118
tissue
430
in vitro differentiated cells
4
stem cell
Organ
812
epithelium
479
kidney
403
connective tissue
382
brain
298
musculature of body
262
pancreas
241
lung
234
intestine
227
vasculature
198
heart
193
bodily fluid
188
embryo
188
limb
184
blood
172
blood vessel
170
skin of body
141
large intestine
140
liver
113
extraembryonic component
98
eye
96
stomach
79
uterus
76
adipose tissue
75
bone element
73
mammary gland
65
prostate gland
65
small intestine
63
artery
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
34
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
18
nerve
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
Project
6201
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
6070
hg19
982
GRCh38
4
hg18
files.file_type!
bed bed9
txt
month_released!
February, 2020
BIOSAMPLE
TYPE
6910 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
2
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
6
1
2
2
B cell
14
10
6
2
+ See 423 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 765 more…
tissue
heart
37
20
1
5
1
2
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
1
+ See 257 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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