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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1647
candidate regulatory elements
1313
target gene predictions
970
histone modifications
812
binding sites
362
accessible chromatin
113
variant allelic effects
36
chromatin state
13
caQTL
9
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2374
February, 2021
1645
September, 2022
284
June, 2020
262
February, 2024
257
May, 2021
104
November, 2021
101
October, 2022
78
May, 2020
41
March, 2020
31
August, 2017
31
August, 2021
30
November, 2022
18
January, 2021
12
February, 2023
8
May, 2022
5
September, 2023
1
August, 2020
1
August, 2022
1
January, 2022
1
November, 2019
Available data
5764
bed bed3+
bed bed9
824
tsv
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5284
Homo sapiens
Biosample type
2102
cell line
1679
tissue
1164
primary cell
335
in vitro differentiated cells
4
stem cell
Organ
382
epithelium
288
brain
275
connective tissue
274
kidney
265
musculature of body
230
lung
217
intestine
190
bodily fluid
181
blood
176
embryo
161
limb
160
skin of body
152
heart
137
vasculature
134
large intestine
109
extraembryonic component
105
blood vessel
pancreas
88
stomach
87
liver
75
uterus
70
mammary gland
63
prostate gland
62
eye
62
small intestine
60
bone element
54
lymph node
54
penis
54
placenta
51
adrenal gland
48
ureter
44
adipose tissue
38
artery
37
thymus
36
gonad
31
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
13
mouth
12
bronchus
12
nerve
11
lymphatic vessel
11
pituitary gland
9
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5159
AMP
104
ENCODE
22
T1D
1
ITG
Genome assembly (visualization)
5278
hg19
422
GRCh38
1
hg18
files.file_type!
bed bed9
bigWig
organ_slims!
pancreas
BIOSAMPLE
TYPE
5286 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 755 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 194 more…
primary cell
monocyte
2
86
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
+ See 265 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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