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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1356
target gene predictions
977
histone modifications
909
accessible chromatin
817
binding sites
683
gene expression
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
68
eQTL
41
chromatin state
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
1678
September, 2022
384
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
August, 2021
128
March, 2020
January, 2022
101
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5918
bed bed3+
898
tsv
bed bed9
542
bigWig
108
txt
40
bigBed bed9
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6892
Homo sapiens
Biosample type
2241
primary cell
2156
cell line
2110
tissue
427
in vitro differentiated cells
4
stem cell
Organ
899
epithelium
574
kidney
411
connective tissue
382
brain
303
musculature of body
260
pancreas
240
lung
231
intestine
231
vasculature
206
heart
193
bodily fluid
192
limb
188
embryo
184
blood
174
blood vessel
167
skin of body
141
liver
139
large intestine
112
extraembryonic component
100
eye
95
stomach
78
adipose tissue
78
uterus
74
bone element
73
mammary gland
64
artery
64
prostate gland
64
small intestine
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
34
spinal cord
27
spleen
20
nerve
20
testis
19
lymphatic vessel
19
lymphoid tissue
19
vein
18
ovary
18
thyroid gland
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
6233
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6056
hg19
902
GRCh38
4
hg18
files.file_type!
bed bed9
bed bed9+
month_released!
January, 2022
BIOSAMPLE
TYPE
6940 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
2
1
2
B cell
14
10
6
2
+ See 440 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 764 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
1
lung
33
17
1
+ See 255 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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