Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
bed bed9
3
bigWig
2
tsv
Organism
141
Homo sapiens
Biosample type
105
tissue
30
cell line
6
primary cell
Organ
729
epithelium
416
kidney
394
connective tissue
381
brain
299
musculature of body
258
pancreas
241
lung
234
intestine
199
heart
193
bodily fluid
188
embryo
186
limb
185
vasculature
184
blood
170
skin of body
147
blood vessel
141
large intestine
139
liver
113
extraembryonic component
98
eye
96
stomach
79
uterus
78
adipose tissue
74
bone element
73
mammary gland
65
prostate gland
65
small intestine
59
adrenal gland
58
artery
57
placenta
54
lymph node
54
penis
48
ureter
42
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
22
testis
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
17
vein
15
mouth
15
skeleton
14
bronchus
14
lymphatic vessel
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
135
AMP
6
ENCODE
Genome assembly (visualization)
137
hg19
10
GRCh38
files.file_type!
bed bed9
month_released!
May, 2020
award.project!
KPMP
BIOSAMPLE
TYPE
141 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download