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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
42
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
bed bed9
3
bigWig
2
tsv
Organism
138
Homo sapiens
Biosample type
104
tissue
28
cell line
6
primary cell
Organ
808
epithelium
555
kidney
391
connective tissue
380
brain
284
musculature of body
240
lung
233
pancreas
228
intestine
203
vasculature
194
heart
186
limb
169
skin of body
165
bodily fluid
156
blood
152
blood vessel
138
large intestine
137
embryo
113
extraembryonic component
110
liver
97
eye
94
stomach
76
adipose tissue
74
bone element
72
mammary gland
65
small intestine
64
prostate gland
63
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
48
ureter
42
gonad
37
thymus
36
esophagus
35
spinal cord
28
spleen
28
uterus
22
testis
19
lymphatic vessel
19
nerve
19
ovary
18
lymphoid tissue
18
thyroid gland
17
vein
15
mouth
15
skeleton
13
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
132
AMP
6
ENCODE
Genome assembly (visualization)
134
hg19
8
GRCh38
files.file_type!
bed bed9
month_released!
May, 2020
February, 2024
BIOSAMPLE
TYPE
138 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
26
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
HCT116
2
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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