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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1339
target gene predictions
977
histone modifications
859
accessible chromatin
817
binding sites
144
eQTL
75
chromatin state
61
variant allelic effects
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
pQTL
2
Fine-mapped variants
2
other
2
variant to gene
Date released
2412
February, 2021
1678
September, 2022
333
November, 2021
311
February, 2024
296
May, 2021
289
June, 2020
May, 2020
106
January, 2022
101
October, 2022
79
August, 2021
66
January, 2020
56
January, 2021
49
March, 2020
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5788
bed bed3+
tsv
bed bed9
493
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6029
Homo sapiens
Biosample type
2149
cell line
1897
tissue
1630
primary cell
348
in vitro differentiated cells
4
stem cell
Organ
560
epithelium
344
connective tissue
314
brain
305
kidney
285
musculature of body
240
lung
231
intestine
192
bodily fluid
183
blood
182
pancreas
178
embryo
170
heart
169
limb
168
skin of body
156
vasculature
139
large intestine
120
blood vessel
113
extraembryonic component
111
liver
96
eye
94
stomach
77
uterus
73
mammary gland
70
bone element
65
small intestine
64
prostate gland
58
adrenal gland
57
placenta
56
adipose tissue
54
lymph node
54
penis
48
ureter
47
artery
40
gonad
37
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
mouth
13
nerve
12
pituitary gland
11
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5604
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5864
hg19
893
GRCh38
4
hg18
files.file_type!
bed bed9
tsv
month_released!
May, 2020
July, 2020
BIOSAMPLE
TYPE
6030 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
chromatin state
variant allelic effects
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
pQTL
Fine-mapped variants
other
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 761 more…
tissue
stomach
40
21
1
3
1
heart
37
20
1
5
1
kidney
29
14
2
10
1
1
brain
29
16
3
2
1
2
lung
33
17
1
+ See 225 more…
primary cell
monocyte
1
86
16
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
4
30
2
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
1
2
1
2
fibroblast
4
16
1
2
6
+ See 328 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 104 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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