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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
907
accessible chromatin
839
candidate regulatory elements
817
binding sites
523
target gene predictions
144
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2412
February, 2021
September, 2022
333
November, 2021
311
February, 2024
296
May, 2021
289
June, 2020
152
May, 2020
106
January, 2022
101
October, 2022
79
August, 2021
66
January, 2020
56
January, 2021
49
March, 2020
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4245
bed bed3+
tsv
542
bigWig
108
txt
40
bigBed bed9
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4457
Homo sapiens
Biosample type
1788
cell line
1389
primary cell
1036
tissue
285
in vitro differentiated cells
4
stem cell
Organ
472
epithelium
274
connective tissue
213
brain
174
kidney
157
pancreas
154
musculature of body
142
bodily fluid
137
blood
124
embryo
122
intestine
119
vasculature
108
heart
100
lung
100
skin of body
89
blood vessel
85
limb
82
liver
80
eye
74
large intestine
69
uterus
48
stomach
47
extraembryonic component
45
mammary gland
43
adipose tissue
43
bone element
38
lymph node
38
prostate gland
36
artery
34
penis
30
adrenal gland
27
small intestine
25
placenta
25
ureter
24
gonad
22
esophagus
16
thymus
15
spleen
14
spinal cord
14
vein
13
testis
12
pituitary gland
10
bone marrow
10
bronchus
10
lymphatic vessel
10
ovary
10
thyroid gland
9
nerve
9
skeleton
8
lymphoid tissue
6
breast
6
mouth
5
trachea
3
tongue
3
urinary bladder
3
vagina
1
nose
1
pericardium
Project
4078
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4321
hg19
895
GRCh38
4
hg18
files.file_type!
bed bed9
tsv
month_released!
September, 2022
BIOSAMPLE
TYPE
4504 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 742 more…
primary cell
monocyte
86
18
1
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
5
1
endothelial cell
1
15
2
7
1
2
1
2
fibroblast
16
1
4
2
6
macrophage
12
3
7
3
1
+ See 336 more…
tissue
islet of Langerhans
1
5
2
1
13
1
3
2
2
2
kidney
2
10
15
1
1
1
retina
1
23
3
1
1
heart
1
5
18
1
1
2
stomach
1
3
21
2
1
+ See 226 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
1
adipocyte
1
4
2
1
4
4
hematopoietic multipotent progenitor cell
1
1
9
1
embryonic stem cell
1
6
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 104 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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