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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
839
candidate regulatory elements
817
binding sites
650
gene expression
521
target gene predictions
382
accessible chromatin
171
eQTL
167
differential activity
136
variant allelic effects
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2576
February, 2021
September, 2022
371
May, 2021
316
February, 2024
289
June, 2020
286
September, 2023
128
March, 2020
111
November, 2021
108
August, 2021
102
January, 2022
101
October, 2022
99
May, 2020
70
March, 2023
64
February, 2020
42
May, 2022
35
August, 2017
33
November, 2022
30
March, 2024
28
January, 2021
18
January, 2020
13
February, 2023
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
November, 2019
1
November, 2020
Available data
4245
bed bed3+
900
tsv
bigWig
108
txt
40
bigBed bed9
bed bed9
34
bed bed9+
csv
15
bigBed narrowPeak
1
bam
Organism
4836
Homo sapiens
Biosample type
1806
cell line
1573
primary cell
1131
tissue
324
in vitro differentiated cells
4
stem cell
Organ
617
epithelium
390
kidney
284
connective tissue
259
brain
175
pancreas
155
vasculature
152
musculature of body
143
bodily fluid
138
blood
132
embryo
116
blood vessel
116
heart
114
intestine
97
skin of body
92
lung
88
limb
84
liver
73
large intestine
70
uterus
60
adipose tissue
46
artery
46
eye
45
stomach
44
extraembryonic component
42
mammary gland
39
prostate gland
38
lymph node
37
bone element
34
penis
25
adrenal gland
25
gonad
25
small intestine
23
placenta
22
esophagus
22
ureter
19
spinal cord
15
spleen
15
thymus
14
testis
14
vein
13
nerve
13
pituitary gland
12
lymphatic vessel
10
ovary
10
thyroid gland
9
lymphoid tissue
8
bone marrow
8
bronchus
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
1
skeleton
Project
4400
AMP
281
KPMP
111
ENCODE
32
T1D
11
community
5
ITG
Genome assembly (visualization)
3886
hg19
622
GRCh38
4
hg18
files.file_type!
bed bed9
csv
bigWig
month_released!
September, 2022
BIOSAMPLE
TYPE
4840 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
target gene predictions
accessible chromatin
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
1
52
H1-hESC
1
2
8
38
1
K562
1
1
2
17
1
1
EndoC_BH1
1
1
8
1
7
3
1
breast cancer cell
11
9
+ See 746 more…
primary cell
monocyte
86
1
15
2
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
3
5
1
endothelial cell
1
2
9
7
2
1
2
2
CD14-positive monocyte
4
15
epithelial cell of proximal tubule
1
1
16
1
+ See 404 more…
tissue
islet of Langerhans
1
2
11
1
2
13
1
3
2
2
2
stomach
1
21
1
2
3
1
heart
1
18
1
3
1
2
2
kidney
2
15
1
7
1
1
1
liver
2
6
1
1
3
2
7
1
2
1
+ See 238 more…
in vitro differentiated cells
neural progenitor cell
15
1
7
1
10
adipocyte
1
2
1
1
4
3
4
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 114 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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