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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
accessible chromatin
73
target gene predictions
72
candidate regulatory elements
49
gene expression
27
binding sites
24
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
6
chromatin state
2
caQTL
2
pQTL
Date released
103
February, 2021
72
September, 2022
50
November, 2021
19
June, 2020
18
February, 2024
17
September, 2023
15
May, 2021
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
9
October, 2022
7
March, 2023
7
November, 2022
6
August, 2017
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2019
Available data
310
bed bed3+
65
tsv
55
bigWig
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
399
Homo sapiens
Biosample type
237
primary cell
87
tissue
46
in vitro differentiated cells
28
cell line
1
stem cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
323
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
326
hg19
81
GRCh38
2
hg18
files.file_type!
bed bed9
organ_slims!
artery
lung
BIOSAMPLE
TYPE
399 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
osteoblast
5
2
2
2
3
2
foreskin fibroblast
1
2
6
4
2
fibroblast of cardiac tissue
2
4
3
+ See 42 more…
tissue
adipose tissue
2
8
7
3
1
4
1
subcutaneous adipose tissue
2
2
5
6
1
1
3
1
omental fat pad
2
2
5
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
1
4
mesenchymal stem cell
1
3
3
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
1
2
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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