Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
78
target gene predictions
49
gene expression
31
binding sites
25
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
7
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
109
February, 2021
80
September, 2022
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2019
Available data
330
bed bed3+
63
tsv
55
bigWig
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
417
Homo sapiens
Biosample type
255
primary cell
87
tissue
46
in vitro differentiated cells
28
cell line
1
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
343
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
346
hg19
81
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
417 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
osteoblast
5
2
2
2
3
2
foreskin fibroblast
1
6
2
4
2
fibroblast of lung
6
4
2
1
+ See 43 more…
tissue
adipose tissue
2
7
8
3
1
4
1
subcutaneous adipose tissue
2
2
5
6
1
1
1
3
omental fat pad
2
5
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
4
mesenchymal stem cell
1
3
3
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download