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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
182
candidate regulatory elements
96
target gene predictions
74
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
20
variant allelic effects
12
eQTL
3
Fine-mapped variants
3
chromatin state
1
caQTL
Date released
214
February, 2021
182
September, 2022
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
410
bed bed3+
279
tsv
bed bed9
87
txt
59
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
717
Homo sapiens
Biosample type
361
primary cell
290
tissue
59
cell line
7
in vitro differentiated cells
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
569
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
420
hg19
74
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
717 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
chromatin state
caQTL
primary cell
hepatocyte
13
1
3
8
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
2
+ See 68 more…
tissue
kidney
7
29
14
10
1
2
1
1
liver
1
13
10
4
1
1
2
7
2
1
right kidney
20
10
1
1
renal cortex interstitium
20
9
1
1
renal pelvis
19
9
2
1
+ See 17 more…
cell line
HepG2
2
3
2
3
5
1
HEK293
3
1
1
2
1
HuH-7
1
1
1
1
1
ACHN
2
1
1
Caki2
2
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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