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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
accessible chromatin
91
candidate regulatory elements
61
target gene predictions
56
gene expression
34
binding sites
26
histone modifications
21
variant allelic effects
19
differential activity
15
eQTL
12
Fine-mapped variants
4
caQTL
4
chromatin state
Date released
101
September, 2022
92
February, 2021
35
September, 2023
33
February, 2024
28
February, 2023
22
March, 2020
22
November, 2022
19
May, 2020
17
January, 2020
17
June, 2020
13
November, 2021
11
August, 2021
9
February, 2020
7
October, 2022
6
May, 2021
4
August, 2017
4
January, 2022
4
March, 2023
4
November, 2019
3
April, 2020
2
May, 2022
1
July, 2020
1
March, 2024
1
September, 2018
Available data
350
bed bed3+
86
tsv
84
bigWig
bed bed9
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
456
Homo sapiens
Biosample type
214
primary cell
183
tissue
45
cell line
14
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
405
AMP
35
KPMP
13
ENCODE
3
LungMap
Genome assembly (visualization)
368
hg19
92
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
456 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
Fine-mapped variants
caQTL
chromatin state
primary cell
hepatocyte
8
1
3
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
endothelial cell of umbilical vein
2
6
4
2
1
1
retinal pigment epithelial cell
3
2
1
2
1
dermis blood vessel endothelial cell
6
2
+ See 36 more…
tissue
liver
4
13
10
1
1
2
1
7
1
2
retina
23
6
3
1
1
1
1
1
pigmented layer of retina
20
coronary artery
3
3
3
1
2
2
3
1
tibial artery
3
3
2
1
2
2
3
+ See 10 more…
cell line
HepG2
2
2
3
3
5
1
WERI-Rb-1
1
2
1
2
1
HuH-7
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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