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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
gene expression
44
accessible chromatin
31
differential activity
27
target gene predictions
24
candidate regulatory elements
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
4
chromatin state
2
sQTL
2
variant to gene
Date released
45
March, 2023
33
May, 2021
31
February, 2021
31
September, 2022
25
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
121
bed bed3+
76
tsv
36
bigWig
14
bigBed narrowPeak
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
224
Homo sapiens
Biosample type
104
tissue
88
primary cell
29
cell line
3
in vitro differentiated cells
Organ
588
epithelium
432
kidney
400
brain
343
connective tissue
293
musculature of body
229
lung
224
pancreas
215
intestine
199
heart
194
limb
193
bodily fluid
190
vasculature
186
embryo
184
blood
160
skin of body
152
blood vessel
137
liver
135
large intestine
110
extraembryonic component
96
eye
87
stomach
81
adipose tissue
77
uterus
72
bone element
67
mammary gland
65
prostate gland
62
artery
61
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
19
vein
17
ovary
17
thyroid gland
15
mouth
15
skeleton
13
pituitary gland
11
breast
11
bronchus
10
lymphatic vessel
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
224
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
135
hg19
30
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
224 results
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Clear Filters
gene expression
accessible chromatin
differential activity
target gene predictions
candidate regulatory elements
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
chromatin state
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
13
1
1
2
2
3
2
2
body of pancreas
2
5
8
1
1
3
pancreas
5
5
5
1
1
1
1
1
endocrine pancreas
4
7
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
3
3
3
1
1
2
1
pancreatic beta cell
3
4
3
1
1
pancreatic alpha cell
3
3
3
1
1
pancreatic acinar cell
3
2
3
1
1
pancreatic delta cell
3
2
3
1
1
+ See 11 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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