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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
45
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
4
chromatin state
2
sQTL
2
variant to gene
Date released
47
March, 2023
33
May, 2021
31
February, 2021
31
September, 2022
22
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
159
bed bed3+
76
tsv
57
bigWig
14
bigBed narrowPeak
bed bed9
3
bam
3
bed gappedPeak
csv
3
xls
2
bigBed bed9
Organism
261
Homo sapiens
Biosample type
126
primary cell
104
tissue
31
cell line
Organ
893
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
261
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
141
large intestine
139
liver
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
221
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
173
hg19
48
GRCh38
files.file_type!
bed bed9
csv
BIOSAMPLE
TYPE
261 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
chromatin state
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
13
1
1
2
2
3
2
2
body of pancreas
2
5
8
1
1
3
pancreas
5
5
5
1
1
1
1
1
endocrine pancreas
4
7
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
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