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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
77
accessible chromatin
67
candidate regulatory elements
50
binding sites
49
gene expression
33
differential activity
30
histone modifications
17
eQTL
11
variant allelic effects
6
chromatin state
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
101
February, 2021
77
September, 2022
53
February, 2024
47
March, 2023
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
10
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
340
bed bed3+
77
tsv
57
bigWig
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
448
Homo sapiens
Biosample type
203
cell line
135
primary cell
107
tissue
3
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
408
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
356
hg19
76
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
448 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
differential activity
histone modifications
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
1
7
2
1
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
1
1
GM06990
1
1
2
2
1
GM19240
2
1
1
2
1
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
2
11
1
13
1
3
2
2
2
body of pancreas
5
8
2
1
1
3
pancreas
5
5
5
1
1
1
1
1
endocrine pancreas
4
7
blood
2
+ See 8 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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