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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
72
gene expression
65
target gene predictions
47
candidate regulatory elements
37
differential activity
23
eQTL
20
histone modifications
18
binding sites
15
variant allelic effects
8
Fine-mapped variants
7
chromatin state
2
sQTL
2
variant to gene
1
caQTL
Date released
63
September, 2022
57
February, 2021
54
February, 2024
51
March, 2023
36
May, 2021
23
November, 2021
20
January, 2021
19
March, 2020
18
August, 2021
9
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
5
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
260
bed bed3+
104
tsv
80
bigWig
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
406
Homo sapiens
Biosample type
187
primary cell
154
tissue
56
cell line
9
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
361
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
283
hg19
94
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
406 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
chromatin state
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
3
1
4
1
2
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 17 more…
tissue
islet of Langerhans
6
11
1
13
1
2
1
2
3
2
2
liver
4
1
10
13
1
7
2
1
2
1
body of pancreas
2
5
8
1
1
3
pancreas
5
5
5
1
1
1
1
1
endocrine pancreas
4
7
+ See 8 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
5
3
1
HuH-7
1
1
1
1
1
Panc1
2
2
8988T
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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