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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
184
candidate regulatory elements
139
target gene predictions
84
accessible chromatin
49
gene expression
33
differential activity
17
binding sites
17
eQTL
13
histone modifications
12
variant allelic effects
5
Fine-mapped variants
5
chromatin state
2
sQTL
2
variant to gene
Date released
203
September, 2022
119
February, 2021
47
March, 2023
38
May, 2021
29
November, 2021
26
February, 2024
20
January, 2021
12
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
6
January, 2022
6
May, 2020
6
October, 2019
5
October, 2022
4
August, 2017
4
January, 2020
3
April, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
454
bed bed3+
bed bed9
77
tsv
68
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
562
Homo sapiens
Biosample type
288
tissue
165
primary cell
106
cell line
3
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
508
AMP
29
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
468
hg19
61
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
562 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
chromatin state
sQTL
variant to gene
tissue
lung
33
17
1
1
placenta
26
15
1
1
1
2
islet of Langerhans
1
6
11
2
13
1
1
2
3
2
2
left lung
26
13
right lung
22
11
1
+ See 11 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
A549
21
19
1
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
2
1
2
1
PC-9
2
2
1
1
1
WI38
5
1
+ See 10 more…
in vitro differentiated cells
pancreatic ductal cell
3
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