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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
50
target gene predictions
49
gene expression
33
candidate regulatory elements
33
differential activity
15
eQTL
11
variant allelic effects
7
histone modifications
5
Fine-mapped variants
5
binding sites
4
chromatin state
2
sQTL
2
variant to gene
Date released
47
March, 2023
41
September, 2022
36
February, 2021
33
May, 2021
26
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
177
bed bed3+
77
tsv
57
bigWig
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
283
Homo sapiens
Biosample type
126
primary cell
118
tissue
36
cell line
3
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
243
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
191
hg19
49
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
283 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
chromatin state
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 12 more…
tissue
islet of Langerhans
6
1
11
13
1
1
2
2
3
2
2
body of pancreas
5
2
8
1
1
3
pancreas
5
5
5
1
1
1
1
1
Peyer's patch
1
3
7
endocrine pancreas
4
7
+ See 9 more…
cell line
EndoC_BH1
8
1
8
3
1
GM18507
1
2
1
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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