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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
candidate regulatory elements
15
target gene predictions
8
binding sites
7
histone modifications
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Date released
29
February, 2021
26
September, 2022
2
May, 2021
1
February, 2024
1
January, 2022
1
March, 2024
Available data
58
bed bed3+
bed bed9
1
tsv
Organism
60
Homo sapiens
Biosample type
40
cell line
12
tissue
8
primary cell
Organ
687
epithelium
525
kidney
358
brain
329
connective tissue
277
musculature of body
226
lung
213
intestine
199
pancreas
198
vasculature
183
heart
181
bodily fluid
176
embryo
174
limb
172
blood
157
skin of body
151
blood vessel
131
large intestine
118
liver
104
extraembryonic component
88
stomach
76
uterus
74
adipose tissue
66
mammary gland
62
small intestine
60
bone element
60
prostate gland
56
artery
53
placenta
52
adrenal gland
51
penis
47
ureter
46
lymph node
41
eye
37
gonad
36
thymus
34
esophagus
33
spinal cord
26
spleen
20
testis
18
nerve
17
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
lymphatic vessel
14
mouth
13
pituitary gland
11
bronchus
10
bone marrow
10
breast
8
vagina
7
skeleton
7
tongue
7
urinary bladder
4
trachea
2
nose
1
pericardium
Project
60
AMP
Genome assembly (visualization)
58
hg19
1
GRCh38
files.file_type!
bed bed9
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
60 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
1
1
LNCAP
2
1
1
1
LNCaP clone FGC
3
2
PC-3
2
1
1
1
RWPE1
2
1
1
1
+ See 5 more…
tissue
prostate gland
4
2
2
2
1
prostate
1
primary cell
epithelial cell of prostate
4
3
luminal epithelial cell of prostatic duct
1
See all biosamples
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