Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
44
target gene predictions
18
binding sites
13
histone modifications
8
accessible chromatin
3
eQTL
2
gene expression
1
chromatin state
1
variant allelic effects
Date released
68
February, 2021
68
September, 2022
8
June, 2020
5
May, 2021
5
November, 2021
4
October, 2022
3
January, 2022
2
March, 2024
1
August, 2017
1
February, 2024
Available data
165
bed bed3+
bed bed9
bigWig
2
tsv
Organism
165
Homo sapiens
Biosample type
78
primary cell
56
cell line
22
tissue
9
in vitro differentiated cells
Organ
723
epithelium
540
kidney
379
brain
364
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
204
vasculature
193
bodily fluid
188
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
119
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
160
AMP
5
ENCODE
Genome assembly (visualization)
160
hg19
8
GRCh38
files.file_type!
bed bed9
bigWig
BIOSAMPLE
TYPE
165 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
chromatin state
variant allelic effects
primary cell
foreskin fibroblast
6
2
4
2
1
foreskin keratinocyte
11
4
keratinocyte
3
5
1
2
1
1
fibroblast of dermis
4
4
1
dermis blood vessel endothelial cell
6
2
+ See 8 more…
cell line
GM23248
2
1
1
1
1
RPMI7951
2
1
1
SK-MEL-5
2
1
1
iPS DF 19.11
2
2
keratinocyte
3
1
+ See 15 more…
tissue
lower leg skin
6
2
skin of body
1
1
3
suprapubic skin
3
skin of forearm
1
1
skin of prepuce of penis
1
1
+ See 2 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download