Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
894
candidate regulatory elements
494
target gene predictions
194
accessible chromatin
113
eQTL
110
gene expression
86
histone modifications
74
Fine-mapped variants
48
variant allelic effects
35
binding sites
25
chromatin state
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
Date released
872
September, 2022
617
February, 2021
104
March, 2020
60
June, 2020
58
January, 2020
56
May, 2020
55
January, 2022
47
February, 2020
46
August, 2021
30
May, 2021
28
March, 2024
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
9
November, 2019
6
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1776
bed bed3+
bed bed9
211
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
2089
Homo sapiens
Biosample type
2230
primary cell
2171
cell line
2089
tissue
426
in vitro differentiated cells
4
stem cell
Organ
297
brain
241
musculature of body
240
kidney
187
limb
181
intestine
171
heart
138
lung
105
large intestine
104
pancreas
87
connective tissue
85
stomach
76
adipose tissue
extraembryonic component
68
blood vessel
68
vasculature
65
eye
61
small intestine
57
epithelium
51
ureter
50
liver
48
adrenal gland
46
placenta
37
thymus
36
artery
32
gonad
29
esophagus
29
spinal cord
28
embryo
28
spleen
22
skin of body
21
nerve
19
bone element
17
ovary
16
thyroid gland
15
skeleton
15
testis
14
lymphoid tissue
13
prostate gland
12
uterus
11
breast
9
mouth
8
tongue
8
urinary bladder
8
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2084
AMP
5
ITG
Genome assembly (visualization)
1897
hg19
246
GRCh38
3
hg18
files.file_type!
bed bed9
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
2089 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
chromatin state
differential activity
variant to gene
pQTL
caQTL
sQTL
tissue
heart
37
20
5
3
1
2
1
stomach
40
21
3
1
1
1
kidney
29
14
10
1
7
2
1
1
brain
29
16
2
2
1
3
1
1
lung
33
17
1
1
+ See 254 more…
See all biosamples
Download