Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
454
gene expression
447
accessible chromatin
348
target gene predictions
328
candidate regulatory elements
207
histone modifications
193
chromatin state
122
differential activity
99
binding sites
74
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
483
September, 2022
449
February, 2021
315
November, 2021
281
September, 2023
244
May, 2021
140
February, 2024
86
May, 2020
52
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
36
January, 2021
31
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
16
March, 2023
9
November, 2022
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
August, 2018
2
May, 2024
1
July, 2020
1
March, 2024
Available data
1525
bed bed3+
544
tsv
370
bigWig
164
bed bed9
108
txt
27
bed bed9+
bigBed bed9
2
bigBed narrowPeak
Organism
2296
Homo sapiens
Biosample type
2509
tissue
2341
primary cell
2256
cell line
462
in vitro differentiated cells
4
stem cell
Organ
817
epithelium
309
kidney
282
connective tissue
167
vasculature
pancreas
112
blood vessel
100
skin of body
63
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
18
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1685
AMP
315
ENCODE
281
KPMP
39
T1D
19
LungMap
2
community
Genome assembly (visualization)
1727
hg19
680
GRCh38
files.file_type!
bigBed bed9
organ_slims!
pancreas
lymph node
BIOSAMPLE
TYPE
2341 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 432 more…
See all biosamples
Download