Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
922
candidate regulatory elements
510
target gene predictions
474
chromatin state
195
accessible chromatin
89
histone modifications
88
eQTL
87
gene expression
74
Fine-mapped variants
48
variant allelic effects
35
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1359
September, 2022
631
February, 2021
103
March, 2020
62
June, 2020
58
January, 2020
57
May, 2020
55
January, 2022
February, 2020
46
August, 2021
30
May, 2021
27
March, 2024
26
February, 2023
26
February, 2024
17
November, 2022
15
August, 2017
8
November, 2019
6
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1824
bed bed3+
480
bed bed9
164
tsv
119
bigWig
bigBed bed9
1
bam
Organism
2538
Homo sapiens
Biosample type
2539
tissue
2451
primary cell
2352
cell line
465
in vitro differentiated cells
4
stem cell
Organ
325
brain
299
musculature of body
297
kidney
232
intestine
226
limb
197
heart
181
lung
134
large intestine
110
pancreas
108
stomach
98
extraembryonic component
90
connective tissue
80
small intestine
79
adipose tissue
75
blood vessel
75
vasculature
68
eye
64
ureter
62
adrenal gland
60
epithelium
60
placenta
55
liver
48
thymus
39
gonad
38
artery
35
embryo
35
esophagus
35
spinal cord
spleen
25
skin of body
22
bone element
21
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2534
AMP
5
ITG
Genome assembly (visualization)
2370
hg19
674
GRCh38
3
hg18
files.file_type!
bigBed bed9
organ_slims!
spleen
month_released!
February, 2020
BIOSAMPLE
TYPE
2539 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
19
5
1
2
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
14
10
2
1
7
1
1
brain
29
16
16
2
3
2
1
1
lung
33
17
16
1
1
+ See 256 more…
See all biosamples
Download