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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
266
gene expression
219
accessible chromatin
135
target gene predictions
119
candidate regulatory elements
94
differential activity
60
chromatin state
45
binding sites
44
variant allelic effects
29
histone modifications
16
eQTL
6
Fine-mapped variants
2
caQTL
Date released
219
February, 2021
175
September, 2022
155
September, 2023
127
November, 2021
78
February, 2024
38
March, 2023
37
May, 2021
29
August, 2021
26
June, 2020
20
January, 2021
18
May, 2020
16
January, 2020
16
November, 2022
14
February, 2020
14
March, 2020
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
August, 2017
3
January, 2022
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
596
bed bed3+
346
tsv
181
bigWig
78
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
bigBed bed9
3
xls
Organism
1035
Homo sapiens
Biosample type
818
primary cell
144
tissue
46
cell line
27
in vitro differentiated cells
Organ
947
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
724
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
666
hg19
255
GRCh38
2
hg18
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
1035 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 147 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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