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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
target gene predictions
56
candidate regulatory elements
49
binding sites
31
chromatin state
26
histone modifications
16
accessible chromatin
4
gene expression
3
eQTL
Date released
87
September, 2022
82
February, 2021
79
February, 2024
20
October, 2022
15
June, 2020
6
May, 2021
4
March, 2024
2
August, 2017
2
August, 2021
2
November, 2021
1
January, 2022
Available data
264
bed bed3+
29
bed bed9
4
tsv
1
bigWig
Organism
300
Homo sapiens
Biosample type
260
cell line
26
tissue
14
primary cell
Organ
947
epithelium
650
kidney
460
brain
458
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
298
AMP
2
ENCODE
Genome assembly (visualization)
295
hg19
111
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
300 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
cell line
HeLa-S3
55
5
1
3
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 25 more…
tissue
tongue
2
4
2
1
uterus
2
3
1
1
1
1
blood
2
endometrium cancer
1
1
cervix - ectocervix
1
+ See 3 more…
primary cell
peripheral blood mononuclear cell
4
1
1
Ishikawa
1
1
1
peripheral blood stem cell
1
1
1
uterine smooth muscle cell
1
1
See all biosamples
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