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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
candidate regulatory elements
55
target gene predictions
44
chromatin state
15
accessible chromatin
9
binding sites
6
histone modifications
5
eQTL
Date released
122
September, 2022
58
February, 2021
11
June, 2020
8
November, 2021
6
May, 2021
5
January, 2022
3
August, 2017
3
February, 2024
2
March, 2020
2
October, 2022
Available data
174
bed bed3+
41
bed bed9
4
bigWig
tsv
Organism
220
Homo sapiens
Biosample type
169
tissue
41
cell line
10
primary cell
Organ
623
epithelium
399
kidney
393
brain
393
connective tissue
358
musculature of body
310
lung
286
intestine
223
limb
217
bodily fluid
216
heart
206
blood
205
embryo
202
skin of body
199
pancreas
194
vasculature
172
large intestine
149
blood vessel
146
extraembryonic component
127
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
66
adipose tissue
64
penis
64
ureter
62
lymph node
57
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
20
vein
18
mouth
18
nerve
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
212
AMP
8
ENCODE
Genome assembly (visualization)
215
hg19
56
GRCh38
files.file_type!
bigBed bed9
tsv
BIOSAMPLE
TYPE
220 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
ovary
8
6
4
1
1
transverse colon
8
5
4
1
1
testis
7
3
3
1
1
1
1
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
colon epithelial cell
3
3
luteal cell
1
1
Leydig cell
1
somatic gonadal cell
1
See all biosamples
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