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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
112
candidate regulatory elements
66
target gene predictions
58
chromatin state
12
accessible chromatin
6
binding sites
6
histone modifications
3
eQTL
3
gene expression
Date released
161
September, 2022
69
February, 2021
10
June, 2020
6
May, 2021
4
August, 2017
4
November, 2021
3
February, 2024
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
206
bed bed3+
54
bed bed9
3
tsv
2
bigWig
Organism
266
Homo sapiens
Biosample type
231
tissue
31
cell line
4
primary cell
Organ
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
262
AMP
4
ENCODE
Genome assembly (visualization)
260
hg19
63
GRCh38
files.file_type!
bigBed bed9
organ_slims!
epithelium
BIOSAMPLE
TYPE
266 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 14 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 2 more…
primary cell
enteric smooth muscle cell
2
2
See all biosamples
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