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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
61
target gene predictions
53
candidate regulatory elements
48
gene expression
33
differential activity
31
chromatin state
16
eQTL
11
variant allelic effects
9
histone modifications
8
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
92
September, 2022
49
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
August, 2017
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
215
bed bed3+
76
tsv
59
bigWig
29
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
bigBed bed9
Organism
348
Homo sapiens
Biosample type
172
tissue
136
primary cell
37
cell line
3
in vitro differentiated cells
Organ
947
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
306
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
256
hg19
80
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
348 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
1
15
26
14
1
2
1
islet of Langerhans
6
1
11
2
13
1
1
2
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
2
1
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 15 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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