Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
target gene predictions
12
candidate regulatory elements
6
chromatin state
4
accessible chromatin
4
binding sites
3
gene expression
2
histone modifications
1
eQTL
Date released
51
February, 2024
18
September, 2022
11
February, 2021
3
June, 2020
3
March, 2024
2
May, 2021
2
November, 2021
1
January, 2022
1
March, 2020
1
October, 2022
Available data
83
bed bed3+
6
bed bed9
3
tsv
1
bigWig
Organism
93
Homo sapiens
Biosample type
65
cell line
23
tissue
5
primary cell
Organ
947
epithelium
650
kidney
460
brain
458
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
91
AMP
2
ENCODE
Genome assembly (visualization)
89
hg19
60
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
93 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
cell line
HeLa-S3
55
5
3
1
Ishikawa
1
tissue
uterus
2
3
1
1
1
1
urinary bladder
2
3
2
1
endometrium cancer
1
1
bladder
1
bladder (urinary bladder)
1
+ See 2 more…
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
See all biosamples
Download