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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
51
gene expression
44
target gene predictions
35
differential activity
28
candidate regulatory elements
19
chromatin state
15
eQTL
7
binding sites
7
histone modifications
7
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
49
September, 2022
47
March, 2023
33
February, 2021
33
May, 2021
21
November, 2021
20
January, 2021
16
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
June, 2020
5
September, 2023
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
Available data
173
bed bed3+
81
tsv
60
bigWig
15
bed bed9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
284
Homo sapiens
Biosample type
129
primary cell
114
tissue
36
cell line
5
in vitro differentiated cells
Organ
935
epithelium
652
kidney
466
brain
457
connective tissue
375
musculature of body
311
lung
289
intestine
266
vasculature
263
pancreas
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
235
AMP
21
ENCODE
20
T1D
5
KPMP
2
community
1
LungMap
Genome assembly (visualization)
188
hg19
66
GRCh38
files.file_type!
bigBed narrowPeak
BIOSAMPLE
TYPE
284 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
5
3
3
3
1
2
1
pancreatic acinar cell
5
3
3
3
1
pancreatic beta cell
7
3
2
3
pancreatic alpha cell
6
3
2
3
pancreatic delta cell
4
3
3
3
+ See 16 more…
tissue
islet of Langerhans
6
11
1
3
13
2
1
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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