Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1354
target gene predictions
977
histone modifications
942
chromatin state
817
binding sites
674
gene expression
385
accessible chromatin
171
eQTL
167
differential activity
136
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
833
September, 2022
72
March, 2020
35
August, 2017
35
May, 2022
8
April, 2019
7
May, 2019
7
October, 2022
6
January, 2020
5
February, 2023
5
February, 2024
5
May, 2021
5
October, 2019
3
May, 2020
2
March, 2023
1
November, 2019
Available data
869
bed bed9
72
tsv
53
bed bed3+
40
bigBed bed9
34
bed bed9+
bigWig
1
bam
Organism
1029
Homo sapiens
Biosample type
585
tissue
208
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
108
brain
82
musculature of body
76
kidney
71
lung
61
heart
59
intestine
59
limb
56
connective tissue
55
epithelium
44
vasculature
39
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
22
pancreas
21
liver
20
small intestine
16
adipose tissue
16
placenta
15
artery
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
spinal cord
11
thymus
10
penis
9
eye
8
gonad
8
lymph node
7
esophagus
7
nerve
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
1027
AMP
2
T1D
Genome assembly (visualization)
1020
hg19
946
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
1029 results
search-icon
table-tab-icon
Clear Filters
chromatin state
Fine-mapped variants
caQTL
tissue
heart
21
stomach
19
brain
18
lung
16
muscle of arm
16
+ See 118 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 90 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download