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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
888
histone modifications
836
target gene predictions
781
binding sites
734
candidate regulatory elements
564
gene expression
433
chromatin state
303
accessible chromatin
162
differential activity
88
variant allelic effects
54
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
1943
February, 2021
1128
September, 2022
345
May, 2021
327
February, 2024
286
September, 2023
226
June, 2020
111
November, 2021
101
October, 2022
69
August, 2021
64
March, 2023
49
May, 2020
46
January, 2022
40
May, 2022
28
January, 2021
25
November, 2022
24
March, 2020
16
August, 2017
16
February, 2020
9
August, 2018
6
February, 2023
2
January, 2020
2
March, 2024
2
October, 2019
1
July, 2020
1
November, 2019
1
November, 2020
Available data
4073
bed bed3+
686
tsv
bigWig
383
bed bed9
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
xls
Organism
4866
Homo sapiens
Biosample type
tissue
2348
cell line
2056
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
730
epithelium
332
kidney
315
connective tissue
214
bodily fluid
204
blood
178
embryo
174
skin of body
159
vasculature
121
lung
119
pancreas
108
brain
105
blood vessel
82
mammary gland
77
liver
69
uterus
65
bone element
63
prostate gland
62
lymph node
62
penis
57
musculature of body
46
intestine
45
extraembryonic component
37
large intestine
34
heart
32
eye
30
artery
21
vein
18
lymphatic vessel
14
bronchus
11
bone marrow
11
placenta
10
gonad
10
pituitary gland
8
esophagus
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
6
stomach
5
adipose tissue
5
adrenal gland
5
trachea
4
nose
2
small intestine
2
thyroid gland
1
ovary
1
pericardium
Project
4435
AMP
281
KPMP
111
ENCODE
32
T1D
9
community
Genome assembly (visualization)
4086
hg19
846
GRCh38
1
hg18
files.file_type!
bigWig
xls
biosample_type!
tissue
BIOSAMPLE
TYPE
4868 results
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Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
gene expression
chromatin state
accessible chromatin
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S3
55
1
5
3
A549
1
19
2
21
18
1
H1-hESC
1
39
2
1
8
1
1
K562
1
23
2
7
7
1
MCF-7
2
6
3
9
5
1
+ See 765 more…
primary cell
monocyte
86
2
1
15
2
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
30
5
7
3
1
B cell
10
14
2
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 411 more…
in vitro differentiated cells
neural progenitor cell
15
5
5
7
4
10
hematopoietic multipotent progenitor cell
1
10
1
19
1
10
1
adipocyte
1
6
1
4
1
6
3
embryonic stem cell
1
1
1
5
6
cardiomyocytes
11
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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