Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
918
candidate regulatory elements
506
target gene predictions
499
chromatin state
100
eQTL
94
gene expression
88
histone modifications
78
accessible chromatin
68
Fine-mapped variants
45
variant allelic effects
35
binding sites
4
variant to gene
3
differential activity
2
caQTL
2
sQTL
1
other
1
pQTL
Date released
1352
September, 2022
607
February, 2021
97
March, 2020
63
June, 2020
53
January, 2022
50
May, 2020
44
February, 2020
29
August, 2021
28
March, 2024
28
May, 2021
21
January, 2020
17
August, 2017
11
February, 2024
8
April, 2019
7
February, 2023
7
May, 2019
7
November, 2022
6
March, 2023
3
October, 2019
2
May, 2022
1
August, 2020
1
August, 2022
1
January, 2018
1
November, 2019
Available data
1801
bed bed3+
478
bed bed9
186
tsv
bigWig
30
bigBed bed9
1
bam
Organism
2442
Homo sapiens
Biosample type
2444
tissue
2317
cell line
1824
primary cell
410
in vitro differentiated cells
3
stem cell
Organ
337
brain
302
musculature of body
284
kidney
232
intestine
222
limb
199
heart
181
lung
134
large intestine
108
stomach
98
extraembryonic component
98
pancreas
connective tissue
80
small intestine
79
adipose tissue
76
blood vessel
76
vasculature
62
adrenal gland
61
ureter
60
placenta
56
liver
48
thymus
41
eye
40
epithelium
39
gonad
36
artery
36
spinal cord
35
embryo
35
esophagus
33
spleen
25
skin of body
23
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
testis
15
prostate gland
14
bone element
13
breast
13
uterus
11
mouth
10
skeleton
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2443
AMP
1
ITG
Genome assembly (visualization)
2273
hg19
624
GRCh38
1
hg18
files.file_type!
bigWig
organ_slims!
connective tissue
BIOSAMPLE
TYPE
2444 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
histone modifications
accessible chromatin
Fine-mapped variants
variant allelic effects
binding sites
variant to gene
differential activity
caQTL
sQTL
other
pQTL
tissue
heart
37
20
21
3
1
2
2
1
stomach
40
21
19
1
1
1
3
brain
29
16
18
2
1
3
1
1
1
kidney
29
14
15
1
7
2
1
1
1
lung
33
17
16
1
1
+ See 232 more…
See all biosamples
Download