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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
247
gene expression
136
target gene predictions
120
candidate regulatory elements
93
differential activity
68
chromatin state
57
accessible chromatin
49
binding sites
38
histone modifications
38
variant allelic effects
11
eQTL
3
Fine-mapped variants
3
caQTL
Date released
212
February, 2021
188
September, 2022
155
September, 2023
49
November, 2021
44
February, 2024
38
March, 2023
36
May, 2021
29
June, 2020
22
August, 2021
15
May, 2020
12
March, 2020
11
February, 2020
10
January, 2021
8
November, 2022
7
October, 2022
6
August, 2017
6
August, 2018
5
February, 2023
3
January, 2020
3
May, 2022
2
March, 2024
1
January, 2022
1
July, 2020
Available data
613
bed bed3+
332
tsv
bigWig
78
txt
62
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
863
Homo sapiens
Biosample type
675
primary cell
96
tissue
68
cell line
24
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
78
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
10
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
647
AMP
155
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
515
hg19
136
GRCh38
2
hg18
files.file_type!
bigWig
bed bed9+
BIOSAMPLE
TYPE
863 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
7
2
2
1
2
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
hepatocyte
8
3
1
1
1
1
4
2
glomerular endothelial cell
14
1
2
1
1
1
endothelial cell of umbilical vein
4
6
5
1
2
1
+ See 134 more…
tissue
liver
1
10
13
1
9
2
1
2
7
1
breast epithelium
3
5
2
1
esophagus squamous epithelium
2
6
2
1
right lobe of liver
1
1
2
1
1
3
pigmented layer of retina
7
+ See 10 more…
cell line
EndoC_BH1
8
1
3
7
1
HepG2
3
2
2
1
3
5
HuH-7
1
1
1
1
1
1
keratinocyte
3
1
HuH-7.5
1
1
1
+ See 10 more…
in vitro differentiated cells
hepatocyte
1
2
1
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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