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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
52
target gene predictions
28
binding sites
22
histone modifications
16
accessible chromatin
16
variant allelic effects
4
caQTL
3
chromatin state
Date released
81
September, 2022
65
February, 2021
13
February, 2024
13
May, 2020
11
June, 2020
6
March, 2020
6
May, 2021
5
October, 2022
4
August, 2021
3
August, 2017
3
February, 2023
2
May, 2022
2
November, 2021
Available data
252
bed bed3+
84
tsv
bigWig
46
bed bed9
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
214
Homo sapiens
Biosample type
103
primary cell
73
tissue
33
cell line
5
in vitro differentiated cells
Organ
382
epithelium
288
brain
275
connective tissue
274
kidney
265
musculature of body
230
lung
217
intestine
190
bodily fluid
181
blood
176
embryo
161
limb
160
skin of body
152
heart
137
vasculature
134
large intestine
109
extraembryonic component
105
blood vessel
104
pancreas
88
stomach
87
liver
75
uterus
70
mammary gland
63
prostate gland
62
eye
62
small intestine
60
bone element
54
lymph node
54
penis
54
placenta
51
adrenal gland
48
ureter
44
adipose tissue
38
artery
37
thymus
36
gonad
31
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
13
mouth
12
bronchus
12
nerve
11
lymphatic vessel
11
pituitary gland
9
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
212
AMP
2
ENCODE
Genome assembly (visualization)
210
hg19
23
GRCh38
1
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
214 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
variant allelic effects
caQTL
chromatin state
primary cell
endothelial cell of umbilical vein
6
4
2
1
1
hepatocyte
1
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
dermis blood vessel endothelial cell
6
2
fibroblast of pulmonary artery
2
1
2
1
1
+ See 20 more…
tissue
liver
13
10
1
2
2
1
1
coronary artery
3
3
2
1
aorta
4
4
tibial artery
3
2
1
2
ascending aorta
4
2
1
+ See 3 more…
cell line
HepG2
2
3
3
5
1
1
HuH-7
1
1
1
1
1
choroid plexus epithelial cell
1
1
1
HuH-7.5
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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