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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1354
target gene predictions
976
histone modifications
817
binding sites
377
accessible chromatin
120
variant allelic effects
75
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2395
February, 2021
1674
September, 2022
288
June, 2020
277
May, 2021
266
February, 2024
111
November, 2021
101
October, 2022
85
May, 2020
45
March, 2020
35
August, 2017
32
August, 2021
30
November, 2022
28
January, 2021
12
February, 2023
8
April, 2019
8
May, 2022
7
January, 2020
7
May, 2019
5
October, 2019
5
September, 2023
2
November, 2019
1
August, 2020
1
August, 2022
1
January, 2022
Available data
5923
bed bed3+
900
tsv
869
bed bed9
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5423
Homo sapiens
Biosample type
2121
cell line
1758
tissue
1200
primary cell
340
in vitro differentiated cells
4
stem cell
Organ
384
epithelium
294
brain
276
connective tissue
275
kidney
268
musculature of body
230
lung
217
intestine
190
bodily fluid
181
blood
176
embryo
165
limb
161
heart
160
skin of body
144
vasculature
134
large intestine
112
blood vessel
109
extraembryonic component
104
pancreas
88
liver
88
stomach
75
uterus
70
mammary gland
63
prostate gland
62
eye
62
small intestine
60
bone element
54
lymph node
54
penis
54
placenta
51
adrenal gland
48
ureter
44
adipose tissue
39
artery
37
thymus
36
gonad
31
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
13
mouth
13
nerve
12
bronchus
11
lymphatic vessel
11
pituitary gland
9
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5281
AMP
111
ENCODE
32
T1D
1
ITG
Genome assembly (visualization)
5417
hg19
458
GRCh38
1
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
5425 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 760 more…
tissue
heart
37
20
1
1
2
2
2
stomach
40
21
1
3
brain
29
16
3
1
1
1
2
kidney
29
14
2
1
1
1
1
1
lung
33
17
+ See 198 more…
primary cell
monocyte
2
86
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
+ See 275 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
4
embryonic stem cell
1
1
1
5
5
mesenchymal stem cell
3
3
1
1
1
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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