Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
698
chromatin state
679
binding sites
673
histone modifications
238
accessible chromatin
131
gene expression
125
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1935
February, 2021
1918
September, 2022
215
June, 2020
181
February, 2024
113
March, 2020
94
May, 2021
70
October, 2022
66
January, 2022
55
May, 2020
48
August, 2021
48
February, 2020
29
March, 2024
25
August, 2017
22
January, 2020
15
March, 2023
9
February, 2023
9
May, 2022
8
April, 2019
8
November, 2022
7
May, 2019
October, 2019
2
January, 2018
2
November, 2019
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3979
bed bed3+
662
bed bed9
234
tsv
bigWig
28
bigBed bed9
7
bed bed9+
1
bam
Organism
4880
Homo sapiens
Biosample type
2529
tissue
2348
cell line
primary cell
in vitro differentiated cells
4
stem cell
Organ
415
brain
324
kidney
319
musculature of body
277
lung
266
intestine
229
limb
209
bodily fluid
206
heart
198
blood
168
large intestine
163
embryo
131
pancreas
120
connective tissue
108
stomach
101
extraembryonic component
95
skin of body
84
vasculature
83
liver
82
adipose tissue
81
epithelium
80
small intestine
79
blood vessel
78
uterus
68
prostate gland
67
bone element
63
placenta
62
adrenal gland
62
lymph node
61
ureter
51
eye
48
thymus
46
gonad
39
artery
39
spinal cord
38
mammary gland
35
esophagus
33
spleen
25
testis
24
lymphoid tissue
23
nerve
21
ovary
20
thyroid gland
17
penis
15
mouth
13
breast
13
pituitary gland
10
skeleton
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4868
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4647
hg19
1001
GRCh38
4
hg18
files.file_type!
bigWig
month_released!
October, 2019
biosample_type!
primary cell
in vitro differentiated cells
BIOSAMPLE
TYPE
4883 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
1
2
3
2
stomach
40
21
19
1
3
1
1
brain
29
16
18
1
3
1
1
2
1
kidney
29
14
15
1
2
1
7
1
1
lung
33
17
16
1
1
+ See 242 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 765 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download