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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1279
target gene predictions
971
histone modifications
810
binding sites
472
gene expression
370
accessible chromatin
165
eQTL
120
variant allelic effects
111
differential activity
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2388
February, 2021
1524
September, 2022
371
May, 2021
339
February, 2024
274
June, 2020
146
September, 2023
125
March, 2020
111
November, 2021
101
January, 2022
99
October, 2022
95
August, 2021
83
May, 2020
70
March, 2023
55
February, 2020
42
May, 2022
35
August, 2017
33
November, 2022
28
January, 2021
28
March, 2024
18
January, 2020
13
February, 2023
9
August, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
November, 2019
1
November, 2020
Available data
5614
bed bed3+
bed bed9
647
tsv
bigWig
38
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5992
Homo sapiens
Biosample type
2136
cell line
1824
tissue
1613
primary cell
417
in vitro differentiated cells
4
stem cell
Organ
723
epithelium
kidney
379
brain
362
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
204
vasculature
193
bodily fluid
188
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
119
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
5698
AMP
141
KPMP
111
ENCODE
32
T1D
9
community
5
ITG
Genome assembly (visualization)
5285
hg19
626
GRCh38
4
hg18
files.file_type!
bigWig
bed bed9
organ_slims!
kidney
BIOSAMPLE
TYPE
5996 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
1
A549
21
19
1
2
1
K562
7
23
1
2
1
1
EndoC_BH1
1
1
1
8
7
1
3
+ See 753 more…
tissue
stomach
40
21
1
1
3
1
heart
37
20
1
1
3
2
2
brain
29
16
3
1
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
+ See 222 more…
primary cell
monocyte
2
86
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
3
1
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 349 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
7
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
3
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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