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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
249
gene expression
194
candidate regulatory elements
168
target gene predictions
103
chromatin state
92
differential activity
58
accessible chromatin
45
binding sites
45
variant allelic effects
30
histone modifications
9
Fine-mapped variants
9
eQTL
2
caQTL
Date released
286
September, 2022
245
February, 2021
155
September, 2023
49
November, 2021
43
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
24
May, 2020
15
August, 2021
15
February, 2020
15
March, 2020
10
January, 2021
8
November, 2022
6
August, 2018
6
October, 2022
5
February, 2023
3
August, 2017
3
January, 2020
3
January, 2022
3
March, 2024
2
May, 2019
1
July, 2020
1
May, 2022
Available data
722
bed bed3+
341
tsv
bigWig
100
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1004
Homo sapiens
Biosample type
669
primary cell
263
tissue
48
cell line
24
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
788
AMP
155
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
656
hg19
180
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
1004 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
accessible chromatin
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
7
2
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
hepatocyte
8
1
3
1
1
1
2
4
glomerular endothelial cell
14
2
1
1
1
1
endothelial cell of umbilical vein
6
4
5
1
2
1
+ See 134 more…
tissue
muscle of arm
33
16
16
1
muscle of leg
27
14
15
1
tibial nerve
2
6
3
4
1
2
3
2
gastrocnemius medialis
8
5
4
1
tibial artery
1
3
2
3
1
2
3
2
+ See 26 more…
cell line
EndoC_BH1
8
1
3
7
1
GM23248
2
1
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
2
1
1
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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