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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
bigWig
Organism
169
Homo sapiens
Biosample type
132
tissue
34
cell line
3
primary cell
Organ
771
epithelium
614
kidney
444
brain
405
connective tissue
357
musculature of body
301
lung
275
intestine
234
vasculature
233
heart
229
limb
220
pancreas
217
bodily fluid
213
embryo
206
blood
197
skin of body
180
blood vessel
169
large intestine
143
extraembryonic component
133
liver
112
stomach
84
adipose tissue
84
mammary gland
82
small intestine
80
uterus
79
bone element
77
prostate gland
73
eye
71
placenta
66
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
48
thymus
47
gonad
43
spinal cord
41
esophagus
32
spleen
25
testis
23
lymphoid tissue
23
nerve
21
ovary
21
thyroid gland
21
vein
18
lymphatic vessel
18
mouth
14
bronchus
12
breast
12
pituitary gland
11
bone marrow
10
skeleton
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
166
AMP
3
ENCODE
Genome assembly (visualization)
167
hg19
40
GRCh38
files.file_type!
bigWig
month_released!
March, 2024
BIOSAMPLE
TYPE
169 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
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