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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
48
target gene predictions
41
chromatin state
9
binding sites
8
accessible chromatin
6
histone modifications
3
gene expression
2
eQTL
1
variant allelic effects
Date released
104
September, 2022
53
February, 2021
8
June, 2020
6
May, 2021
4
August, 2017
3
February, 2024
3
March, 2024
3
November, 2021
2
January, 2020
2
January, 2022
2
March, 2020
2
October, 2022
1
May, 2020
Available data
154
bed bed3+
37
bed bed9
bigWig
3
tsv
2
bigBed bed9
Organism
193
Homo sapiens
Biosample type
135
tissue
36
cell line
22
primary cell
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
190
AMP
3
ENCODE
Genome assembly (visualization)
187
hg19
44
GRCh38
files.file_type!
bigWig
organ_slims!
esophagus
BIOSAMPLE
TYPE
193 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
2
1
RKO
1
1
1
1
+ See 4 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
1
1
colon epithelial cell
3
See all biosamples
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