Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
target gene predictions
10
candidate regulatory elements
5
chromatin state
4
binding sites
3
accessible chromatin
2
gene expression
2
histone modifications
1
eQTL
Date released
51
February, 2024
15
September, 2022
10
February, 2021
3
June, 2020
2
March, 2024
May, 2021
1
January, 2022
1
November, 2021
1
October, 2022
Available data
77
bed bed3+
5
bed bed9
2
tsv
bigWig
Organism
84
Homo sapiens
Biosample type
64
cell line
12
tissue
4
in vitro differentiated cells
4
primary cell
Organ
739
epithelium
616
kidney
434
brain
389
connective tissue
353
musculature of body
298
lung
272
intestine
232
vasculature
229
heart
227
limb
214
bodily fluid
206
embryo
203
blood
194
skin of body
187
pancreas
178
blood vessel
166
large intestine
140
extraembryonic component
130
liver
112
stomach
82
mammary gland
81
adipose tissue
81
small intestine
80
uterus
79
bone element
76
prostate gland
73
eye
70
placenta
65
adrenal gland
64
artery
63
penis
61
lymph node
61
ureter
48
gonad
47
thymus
43
esophagus
42
spinal cord
32
spleen
26
testis
24
lymphoid tissue
23
nerve
21
ovary
21
thyroid gland
21
vein
19
mouth
18
lymphatic vessel
14
bronchus
12
breast
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
83
AMP
1
ENCODE
Genome assembly (visualization)
81
hg19
58
GRCh38
files.file_type!
bigWig
month_released!
May, 2021
BIOSAMPLE
TYPE
84 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
eQTL
cell line
HeLa-S3
54
5
3
1
Ishikawa
1
tissue
uterus
1
3
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
in vitro differentiated cells
olfactory neurosphere cell line
1
1
1
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
Download