Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
518
target gene predictions
511
chromatin state
accessible chromatin
90
eQTL
89
histone modifications
48
variant allelic effects
binding sites
3
pQTL
2
Fine-mapped variants
2
caQTL
2
gene expression
2
sQTL
2
variant to gene
1
other
Date released
1376
September, 2022
570
February, 2021
56
January, 2022
53
May, 2020
30
August, 2021
30
May, 2021
29
March, 2020
19
August, 2017
9
May, 2019
8
April, 2019
8
February, 2024
5
January, 2020
4
March, 2023
3
October, 2019
1
August, 2020
1
August, 2022
1
February, 2020
1
February, 2023
1
May, 2022
1
November, 2019
Available data
1617
bed bed3+
486
bed bed9
tsv
31
bigBed bed9
2
bigWig
1
bam
Organism
2206
Homo sapiens
Biosample type
2207
tissue
1524
cell line
1296
primary cell
288
in vitro differentiated cells
4
stem cell
Organ
283
musculature of body
266
kidney
255
brain
222
intestine
199
limb
177
lung
169
heart
128
large intestine
103
stomach
94
extraembryonic component
79
small intestine
74
pancreas
60
adrenal gland
60
connective tissue
60
ureter
58
blood vessel
58
placenta
58
vasculature
55
adipose tissue
46
liver
46
thymus
34
gonad
31
embryo
31
esophagus
30
spinal cord
30
spleen
26
artery
25
epithelium
23
eye
21
skin of body
19
ovary
18
thyroid gland
16
lymphoid tissue
16
nerve
15
testis
11
breast
11
prostate gland
10
bone element
10
skeleton
9
mouth
9
vagina
8
tongue
8
urinary bladder
8
uterus
3
bodily fluid
2
blood
2
pituitary gland
1
mammary gland
1
penis
Project
2202
AMP
5
ITG
Genome assembly (visualization)
2129
hg19
548
GRCh38
3
hg18
files.file_type!
tsv
annotation_type!
binding sites
accessible chromatin
BIOSAMPLE
TYPE
2207 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
histone modifications
variant allelic effects
pQTL
Fine-mapped variants
caQTL
gene expression
sQTL
variant to gene
other
tissue
stomach
40
21
19
1
1
heart
37
20
21
1
2
brain
29
16
18
2
3
1
lung
33
17
16
1
muscle of arm
33
16
16
1
+ See 200 more…
See all biosamples
Download