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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
21
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
eQTL
4
gene expression
4
variant allelic effects
1
caQTL
Date released
46
September, 2022
22
February, 2021
16
February, 2024
7
March, 2020
5
June, 2020
5
November, 2021
4
August, 2021
3
August, 2017
3
May, 2020
3
May, 2021
2
January, 2020
2
May, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
101
bed bed3+
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
121
Homo sapiens
Biosample type
45
primary cell
44
tissue
28
cell line
4
in vitro differentiated cells
Organ
622
epithelium
397
kidney
382
brain
378
connective tissue
356
musculature of body
309
lung
283
intestine
225
limb
223
heart
215
bodily fluid
205
embryo
204
blood
199
skin of body
199
vasculature
187
pancreas
170
large intestine
154
blood vessel
145
extraembryonic component
121
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
56
adipose tissue
56
artery
49
thymus
45
gonad
40
esophagus
37
spinal cord
32
spleen
23
lymphoid tissue
23
testis
22
vein
21
ovary
21
thyroid gland
18
nerve
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
1
pericardium
Project
116
AMP
5
ENCODE
Genome assembly (visualization)
115
hg19
46
GRCh38
1
hg18
files.file_type!
tsv
annotation_type!
eQTL
files.file_type!!
tsv
BIOSAMPLE
TYPE
121 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
gene expression
variant allelic effects
caQTL
primary cell
hepatocyte
8
1
3
1
4
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
3
1
1
1
1
1
Liver fetal (hepatocyte)
1
tissue
liver
4
13
10
9
2
1
1
right lobe of liver
2
1
1
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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