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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
20
accessible chromatin
20
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
7
eQTL
4
gene expression
4
variant allelic effects
1
caQTL
Date released
46
September, 2022
22
February, 2021
16
February, 2024
10
August, 2021
7
March, 2020
5
June, 2020
3
August, 2017
3
May, 2020
3
May, 2021
2
January, 2020
2
May, 2022
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
96
bed bed3+
tsv
19
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
123
Homo sapiens
Biosample type
51
tissue
40
primary cell
28
cell line
4
in vitro differentiated cells
Organ
498
epithelium
399
brain
398
kidney
350
musculature of body
345
connective tissue
301
lung
267
intestine
227
limb
217
bodily fluid
216
heart
206
blood
203
embryo
196
vasculature
192
skin of body
183
pancreas
166
large intestine
154
blood vessel
143
extraembryonic component
123
liver
108
stomach
103
eye
84
bone element
81
mammary gland
80
small intestine
79
uterus
77
prostate gland
71
placenta
67
adipose tissue
64
penis
64
ureter
62
adrenal gland
62
lymph node
59
artery
48
thymus
46
gonad
39
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
nerve
18
mouth
18
skeleton
14
bronchus
13
lymphatic vessel
12
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
123
AMP
ENCODE
Genome assembly (visualization)
115
hg19
42
GRCh38
2
hg18
files.file_type!
tsv
award.project!
ENCODE
BIOSAMPLE
TYPE
123 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
caQTL
tissue
liver
13
4
10
9
2
1
7
1
right lobe of liver
2
1
1
primary cell
hepatocyte
1
7
2
1
4
1
4
2
endothelial cell of hepatic sinusoid
4
6
hepatic stellate cell
1
2
1
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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