Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
34
target gene predictions
32
chromatin state
9
accessible chromatin
5
histone modifications
3
binding sites
1
eQTL
Date released
96
September, 2022
32
February, 2021
6
June, 2020
3
November, 2021
2
May, 2021
1
January, 2022
1
October, 2022
Available data
108
bed bed3+
32
bed bed9
3
bigWig
Organism
141
Homo sapiens
Biosample type
98
tissue
40
primary cell
in vitro differentiated cells
3
cell line
Organ
607
epithelium
400
kidney
396
brain
359
musculature of body
347
connective tissue
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
201
pancreas
200
vasculature
193
skin of body
177
embryo
172
large intestine
157
blood vessel
141
extraembryonic component
124
liver
117
stomach
101
eye
85
bone element
84
mammary gland
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
66
adipose tissue
64
ureter
62
lymph node
59
artery
58
penis
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
14
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
1
pericardium
Project
138
AMP
3
ENCODE
Genome assembly (visualization)
140
hg19
36
GRCh38
files.file_type!
tsv
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
141 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
tissue
placenta
26
15
14
1
2
1
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
umbilical cord
2
1
1
1
1
amnion
2
1
1
+ See 1 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
epithelial cell of amnion
1
1
1
+ See 5 more…
cell line
HTR-8/Svneo
1
1
1
See all biosamples
Download