Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
480
accessible chromatin
target gene predictions
324
candidate regulatory elements
207
histone modifications
195
chromatin state
95
binding sites
81
variant allelic effects
44
eQTL
39
gene expression
10
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
324
February, 2021
319
September, 2022
222
November, 2021
142
May, 2021
111
February, 2024
70
May, 2020
51
June, 2020
40
May, 2022
36
January, 2022
30
October, 2022
28
January, 2021
23
January, 2020
19
April, 2020
17
August, 2021
14
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
4
March, 2020
3
February, 2023
2
November, 2020
1
June, 2021
Available data
1206
bed bed3+
tsv
405
bigWig
162
bed bed9
108
txt
27
bed bed9+
13
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1442
Homo sapiens
Biosample type
1928
cell line
1895
tissue
1487
primary cell
330
in vitro differentiated cells
1
stem cell
Organ
400
epithelium
196
connective tissue
106
vasculature
74
blood vessel
74
skin of body
62
kidney
55
pancreas
45
musculature of body
41
liver
35
mammary gland
34
penis
31
brain
31
extraembryonic component
26
lung
23
heart
artery
20
eye
17
embryo
16
vein
15
intestine
13
bronchus
11
bone element
10
bone marrow
9
blood
9
bodily fluid
9
lymphatic vessel
9
placenta
7
adrenal gland
7
esophagus
7
prostate gland
7
stomach
5
trachea
4
uterus
3
gonad
3
large intestine
3
mouth
3
spinal cord
2
small intestine
2
thyroid gland
1
adipose tissue
1
ovary
1
pericardium
1
testis
1
thymus
Project
1215
AMP
222
ENCODE
31
T1D
19
LungMap
Genome assembly (visualization)
1413
hg19
577
GRCh38
files.file_type!
tsv
organ_slims!
artery
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
1487 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
gene expression
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
7
30
1
common myeloid progenitor, CD34-positive
27
13
B cell
6
14
8
fibroblast
16
1
6
2
+ See 330 more…
See all biosamples
Download