Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
479
accessible chromatin
368
target gene predictions
324
candidate regulatory elements
207
histone modifications
195
chromatin state
95
binding sites
81
variant allelic effects
44
eQTL
39
gene expression
10
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
478
September, 2022
331
November, 2021
326
February, 2021
187
May, 2021
117
February, 2024
86
May, 2020
56
January, 2021
51
June, 2020
40
May, 2022
37
January, 2022
30
October, 2022
23
January, 2020
19
April, 2020
17
August, 2021
14
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
February, 2023
2
November, 2020
1
June, 2021
Available data
1573
bed bed3+
tsv
407
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1809
Homo sapiens
Biosample type
2388
tissue
2327
cell line
1854
primary cell
395
in vitro differentiated cells
4
stem cell
Organ
514
epithelium
246
connective tissue
124
vasculature
100
skin of body
86
blood vessel
79
pancreas
71
kidney
50
musculature of body
46
mammary gland
45
liver
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
artery
23
eye
23
intestine
22
embryo
20
vein
16
bronchus
14
bone element
13
bone marrow
12
lymphatic vessel
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1445
AMP
331
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1780
hg19
692
GRCh38
files.file_type!
tsv
organ_slims!
artery
ovary
BIOSAMPLE
TYPE
1854 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
gene expression
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
30
1
B cell
6
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 338 more…
See all biosamples
Download