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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1246
target gene predictions
977
histone modifications
817
binding sites
691
accessible chromatin
144
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2412
February, 2021
1678
September, 2022
311
February, 2024
296
May, 2021
289
June, 2020
152
May, 2020
106
January, 2022
101
October, 2022
79
August, 2021
66
January, 2020
56
January, 2021
49
March, 2020
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5590
bed bed3+
tsv
bed bed9
324
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5802
Homo sapiens
Biosample type
2151
cell line
1954
tissue
1383
primary cell
355
in vitro differentiated cells
4
stem cell
Organ
448
epithelium
333
brain
321
kidney
304
connective tissue
279
musculature of body
231
lung
212
intestine
192
bodily fluid
183
blood
177
limb
176
embryo
170
heart
170
pancreas
164
vasculature
158
skin of body
133
large intestine
127
blood vessel
110
extraembryonic component
109
liver
94
eye
85
stomach
75
uterus
70
bone element
67
mammary gland
64
prostate gland
61
small intestine
59
adipose tissue
55
placenta
54
lymph node
54
penis
51
artery
51
ureter
48
adrenal gland
38
gonad
37
thymus
32
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
15
nerve
15
skeleton
14
mouth
12
bronchus
12
pituitary gland
11
bone marrow
11
lymphatic vessel
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5756
AMP
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5666
hg19
568
GRCh38
4
hg18
files.file_type!
tsv
bed bed9
award.project!
ENCODE
BIOSAMPLE
TYPE
5849 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 761 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
1
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
2
1
lung
33
17
1
+ See 230 more…
primary cell
monocyte
2
86
1
18
4
2
1
1
CD8-positive, alpha-beta T cell
7
4
30
3
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
3
CD14-positive monocyte
8
19
+ See 286 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
embryonic stem cell
1
1
1
6
mesenchymal stem cell
3
3
1
1
1
+ See 106 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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