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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
817
binding sites
624
accessible chromatin
144
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2412
February, 2021
1678
September, 2022
333
November, 2021
311
February, 2024
296
May, 2021
June, 2020
152
May, 2020
106
January, 2022
101
October, 2022
79
August, 2021
66
January, 2020
56
January, 2021
49
March, 2020
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5635
bed bed3+
tsv
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5846
Homo sapiens
Biosample type
1999
cell line
1891
tissue
1663
primary cell
334
in vitro differentiated cells
4
stem cell
Organ
550
epithelium
334
connective tissue
312
brain
309
kidney
284
musculature of body
234
lung
221
intestine
184
pancreas
180
bodily fluid
175
heart
171
blood
171
limb
168
embryo
164
vasculature
160
skin of body
132
large intestine
126
blood vessel
109
liver
107
extraembryonic component
92
eye
91
stomach
75
uterus
69
mammary gland
66
bone element
64
small intestine
59
prostate gland
58
adipose tissue
57
adrenal gland
55
placenta
51
penis
50
ureter
48
artery
46
lymph node
37
thymus
36
gonad
34
esophagus
28
spinal cord
26
spleen
19
testis
17
ovary
17
thyroid gland
17
vein
16
lymphoid tissue
15
skeleton
14
nerve
13
bronchus
13
lymphatic vessel
13
mouth
12
bone marrow
12
pituitary gland
9
breast
7
vagina
6
tongue
6
urinary bladder
4
trachea
2
nose
1
pericardium
Project
5467
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5711
hg19
901
GRCh38
4
hg18
files.file_type!
tsv
bed bed9
month_released!
June, 2020
BIOSAMPLE
TYPE
5893 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
MCF-7
9
6
2
3
+ See 745 more…
tissue
heart
37
20
1
1
3
2
stomach
40
21
1
1
kidney
29
14
2
1
9
1
1
brain
29
16
3
1
1
2
1
lung
33
17
1
+ See 227 more…
primary cell
monocyte
2
86
1
16
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
2
15
1
2
1
2
B cell
14
10
6
+ See 339 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
1
3
4
embryonic stem cell
1
1
1
6
T-cell acute lymphoblastic leukemia
5
3
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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